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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZNF740Zinc finger protein 740. (240 aa)    
Predicted Functional Partners:
BTBD16
BTB domain containing 16.
      
 0.640
ELF5
E74 like ETS transcription factor 5.
    
 
 0.587
NANOG
Homeobox domain-containing protein.
    
 0.566
ENSOCUP00000038999
Uncharacterized protein.
    
 0.566
ARHGAP15
Rho GTPase activating protein 15.
     
 0.560
KIAA1328
KIAA1328.
      
 0.525
ANKRD13C
Ankyrin repeat domain 13C.
      
 0.522
ATF7
Cyclic AMP-dependent transcription factor ATF-7; Plays important functions in early cell signaling. Binds the cAMP response element (CRE) (consensus: 5'-GTGACGT[AG][AG]-3'), a sequence present in many viral and cellular promoters.
   
 0.520
VSTM4
V-set and transmembrane domain containing 4.
   
 0.502
ARL4A
ADP ribosylation factor like GTPase 4A.
    
 0.489
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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