Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MYF6Myogenic factor 6. (242 aa)    
Predicted Functional Partners:
ENSOCUP00000048431
Uncharacterized protein.
    
 0.860
PAX7
Paired box 7.
   
 
 0.810
PAX3
Paired box 3.
   
 
 0.793
TCF12
Transcription factor 12.
    
 0.778
TCF4
Transcription factor 4.
    
 0.778
MEF2D
Myocyte enhancer factor 2D.
    
 0.754
MEF2A
Myocyte enhancer factor 2A.
   
 0.754
MEF2C
Myocyte enhancer factor 2C.
    
 0.742
MSTN
Myostatin.
   
  
 0.725
MYOZ1
Uncharacterized protein.
   
  
 0.691
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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