Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SMPDL3AAcid sphingomyelinase-like phosphodiesterase. (457 aa)    
Predicted Functional Partners:
GSTT4
Glutathione S-transferase theta 4; Belongs to the GST superfamily.
      
 0.818
BTBD10
BTB domain containing 10.
      
 0.741
TATDN2
Uncharacterized protein.
      
 0.702
SQOR
Pyr_redox_2 domain-containing protein.
      
 0.660
SMPD4
Sphingomyelin phosphodiesterase 4.
      
 0.560
BRINP1
BMP/retinoic acid inducible neural specific 1.
      
 0.548
CEP104
Centrosomal protein 104.
      
 0.527
SMPD2
Sphingomyelin phosphodiesterase 2.
      
 0.514
ZNF330
Zinc finger protein 330.
      
 0.509
FAM227A
Uncharacterized protein.
      
 0.498
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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