LMO2 protein (Oryctolagus cuniculus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

LMO2

LIM domain only 2. (158 aa)

Predicted Functional Partners:

TAL1

0.999

LDB1

0.999

GATA1

0.999

RUNX1

0.930

LDB2

0.930

ENSOCUP00000048431

0.856

GATA3

0.851

TCF12

0.828

TAL2

0.805

GFI1B

0.802

Your Current Organism:

Oryctolagus cuniculus

NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSOCUP00000048431	GATA1	ENSOCUP00000048431	ENSOCUP00000025590	Uncharacterized protein.	GATA binding protein 1.	0.757
ENSOCUP00000048431	GATA3	ENSOCUP00000048431	ENSOCUP00000015302	Uncharacterized protein.	GATA binding protein 3.	0.628
ENSOCUP00000048431	LDB1	ENSOCUP00000048431	ENSOCUP00000017993	Uncharacterized protein.	LIM domain binding 1.	0.838
ENSOCUP00000048431	LDB2	ENSOCUP00000048431	ENSOCUP00000033561	Uncharacterized protein.	LIM domain binding 2.	0.830
ENSOCUP00000048431	LMO2	ENSOCUP00000048431	ENSOCUP00000001318	Uncharacterized protein.	LIM domain only 2.	0.856
ENSOCUP00000048431	RUNX1	ENSOCUP00000048431	ENSOCUP00000011814	Uncharacterized protein.	Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX.	0.478
ENSOCUP00000048431	TAL1	ENSOCUP00000048431	ENSOCUP00000014817	Uncharacterized protein.	TAL bHLH transcription factor 1, erythroid differentiation factor.	0.936
ENSOCUP00000048431	TAL2	ENSOCUP00000048431	ENSOCUP00000030229	Uncharacterized protein.	TAL bHLH transcription factor 2.	0.612
ENSOCUP00000048431	TCF12	ENSOCUP00000048431	ENSOCUP00000015298	Uncharacterized protein.	Transcription factor 12.	0.501
GATA1	ENSOCUP00000048431	ENSOCUP00000025590	ENSOCUP00000048431	GATA binding protein 1.	Uncharacterized protein.	0.757
GATA1	GATA3	ENSOCUP00000025590	ENSOCUP00000015302	GATA binding protein 1.	GATA binding protein 3.	0.652
GATA1	GFI1B	ENSOCUP00000025590	ENSOCUP00000001542	GATA binding protein 1.	Growth factor independent 1B transcriptional repressor.	0.893
GATA1	LDB1	ENSOCUP00000025590	ENSOCUP00000017993	GATA binding protein 1.	LIM domain binding 1.	0.996
GATA1	LDB2	ENSOCUP00000025590	ENSOCUP00000033561	GATA binding protein 1.	LIM domain binding 2.	0.788
GATA1	LMO2	ENSOCUP00000025590	ENSOCUP00000001318	GATA binding protein 1.	LIM domain only 2.	0.999
GATA1	RUNX1	ENSOCUP00000025590	ENSOCUP00000011814	GATA binding protein 1.	Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX.	0.937
GATA1	TAL1	ENSOCUP00000025590	ENSOCUP00000014817	GATA binding protein 1.	TAL bHLH transcription factor 1, erythroid differentiation factor.	0.998
GATA1	TAL2	ENSOCUP00000025590	ENSOCUP00000030229	GATA binding protein 1.	TAL bHLH transcription factor 2.	0.477
GATA1	TCF12	ENSOCUP00000025590	ENSOCUP00000015298	GATA binding protein 1.	Transcription factor 12.	0.546
GATA3	ENSOCUP00000048431	ENSOCUP00000015302	ENSOCUP00000048431	GATA binding protein 3.	Uncharacterized protein.	0.628