Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
PHYHIPLPhytanoyl-CoA 2-hydroxylase interacting protein like. (584 aa)    
Predicted Functional Partners:
TMA16
Translation machinery associated 16 homolog.
      
 0.600
ZSWIM3
Zinc finger SWIM-type containing 3.
      
 0.528
PHACTR3
Phosphatase and actin regulator.
   
  
 0.519
COMTD1
Catechol-O-methyltransferase domain containing 1.
      
 0.511
ZNF23
Zinc finger protein 23.
      
 0.495
DNAJB3
J domain-containing protein.
   
  
 0.488
NUS1
NUS1 dehydrodolichyl diphosphate synthase subunit.
      
 0.481
TAF1A
TATA-box binding protein associated factor, RNA polymerase I subunit A.
      
 0.480
RASGEF1C
RasGEF domain family member 1C.
      
 0.480
ZNF507
Zinc finger protein 507.
      
 0.479
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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