STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHYHIPLPhytanoyl-CoA 2-hydroxylase interacting protein like. (584 aa)    
Predicted Functional Partners:
TMA16
Translation machinery associated 16 homolog.
      
 0.687
PHACTR3
Phosphatase and actin regulator.
      
 0.585
COMTD1
Catechol-O-methyltransferase domain containing 1.
      
 0.540
ZSWIM3
Zinc finger SWIM-type containing 3.
      
 0.540
ZNF507
Zinc finger protein 507.
      
 0.525
ZNF23
Zinc finger protein 23.
      
 0.525
NUS1
NUS1 dehydrodolichyl diphosphate synthase subunit.
      
 0.523
RASGEF1C
RasGEF domain family member 1C.
      
 0.523
TAF1A
TATA-box binding protein associated factor, RNA polymerase I subunit A.
      
 0.506
DNAJB3
J domain-containing protein.
      
 0.495
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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