Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CLRN2Clarin 2. (232 aa)    
Predicted Functional Partners:
GRXCR2
Glutaredoxin and cysteine rich domain containing 2.
   
  
 0.819
PPP1R17
Uncharacterized protein.
      
 0.725
LOC100344381
Uncharacterized protein.
   
  
 0.717
CRKL
CRK like proto-oncogene, adaptor protein.
    
 0.704
CHRNA9
Cholinergic receptor nicotinic alpha 9 subunit.
   
  
 0.701
EMB
Embigin.
      
 0.681
STRC
Stereocilin (Predicted).
     
 0.648
TMC1
Transmembrane channel-like protein.
   
 
 0.631
ELMO1
Engulfment and cell motility 1.
    
 0.567
ELMO3
Engulfment and cell motility 3.
    
 0.567
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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