Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM104Transmembrane protein 104. (574 aa)    
Predicted Functional Partners:
NAT9
N-acetyltransferase domain-containing protein.
   
  
 0.796
WDR54
WD repeat domain 54.
      
 0.632
WDR53
WD repeat domain 53.
      
 0.625
SUPV3L1
Suv3 like RNA helicase.
      
 0.621
TMEM86A
Transmembrane protein 86A.
      
 0.581
LHFPL2
LHFPL tetraspan subfamily member 2.
      
 0.530
PALD1
Phosphatase domain containing paladin 1.
      
 0.515
GRIN2C
Uncharacterized protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
      
 0.506
FBLIM1
Filamin binding LIM protein 1.
      
 0.491
FADS6
Fatty acid desaturase 6.
      
 0.473
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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