STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRIM1Cysteine rich transmembrane BMP regulator 1. (984 aa)    
Predicted Functional Partners:
G1U1Y5_RABIT
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.694
FAU
Ubiquitin-like domain-containing protein.
   
  0.694
ENSOCUP00000046875
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.694
ENSOCUP00000049185
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.694
FEZ2
Fasciculation and elongation protein zeta 2.
      
 0.622
GP1BA
Glycoprotein Ib platelet subunit alpha.
    
 0.602
ARHGEF17
Rho guanine nucleotide exchange factor 17.
   
  
 0.552
G1TZC2_RABIT
Uncharacterized protein.
   
 
 0.531
ENSOCUP00000032071
RanBD1 domain-containing protein.
   
 
 0.531
GALNT18
Polypeptide N-acetylgalactosaminyltransferase.
     
 0.526
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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