Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CRIM1Cysteine rich transmembrane BMP regulator 1. (984 aa)    
Predicted Functional Partners:
FEZ2
Fasciculation and elongation protein zeta 2.
      
 0.695
GP1BA
Glycoprotein Ib platelet subunit alpha.
   
 0.573
NUP214
Nucleoporin 214.
   
 0.560
SEMA3G
Semaphorin 3G; Belongs to the semaphorin family.
   
 
 0.551
ARHGEF17
Rho guanine nucleotide exchange factor 17.
   
  
 0.551
NUP43
Nucleoporin 43.
    
 0.550
FREM1
FRAS1 related extracellular matrix 1.
    
 0.548
AAAS
Aladin WD repeat nucleoporin.
    
 0.546
KLHL14
Kelch like family member 14.
      
 0.545
KCNS1
Potassium voltage-gated channel modifier subfamily S member 1; Belongs to the potassium channel family.
   
 
 0.544
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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