STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G1SFT5_RABITUncharacterized protein. (515 aa)    
Predicted Functional Partners:
CHD1L
Chromodomain helicase DNA binding protein 1 like.
 
  
 
 0.906
CHD2
DUF4208 domain-containing protein.
 
      0.900
ENSOCUP00000045944
Helicase C-terminal domain-containing protein.
 
      0.899
FANCM
FA complementation group M.
    
 0.584
ARID4A
AT-rich interaction domain 4A.
   
 0.573
ARID4B
AT-rich interaction domain 4B.
   
 0.568
SUPT16H
SPT16 homolog, facilitates chromatin remodeling subunit.
   
 
 0.550
POLR2C
RNA polymerase II subunit C.
   
 0.547
DDX6
DEAD-box helicase 6; Belongs to the DEAD box helicase family.
   
 0.544
ACTR5
Actin related protein 5; Belongs to the actin family.
    
 0.540
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.