Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LNPEPLeucyl and cystinyl aminopeptidase. (1025 aa)    
Predicted Functional Partners:
TBC1D4
TBC1 domain family member 4.
   
 
 0.914
TNKS2
Poly [ADP-ribose] polymerase.
   
 
 0.836
LAP3
Leucine aminopeptidase 3.
   
 0.767
TNKS
Poly [ADP-ribose] polymerase.
   
 
 0.737
SSH3
Slingshot protein phosphatase 3.
   
  
 0.697
DDX56
DEAD-box helicase 56.
   
 0.676
AGT
Angiotensinogen; Belongs to the serpin family.
   
 0.646
OXT
Oxytocin; Belongs to the vasopressin/oxytocin family.
   
 
 0.562
SLC2A4
MFS domain-containing protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
    
 0.561
C5orf30
Chromosome 5 open reading frame 30.
      
 0.561
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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