Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VWCEVon Willebrand factor C and EGF domains. (962 aa)    
Predicted Functional Partners:
ITFG2
Integrin alpha FG-GAP repeat containing 2.
    
 
 0.765
LETMD1
LETM1 domain containing 1.
      
 0.730
KPTN
Kaptin, actin binding protein.
    
 
 0.612
CSAD
Cysteine sulfinic acid decarboxylase.
     
 0.584
SQSTM1
Sequestosome 1.
    
   0.559
SEH1L
SEH1 like nucleoporin; Belongs to the WD repeat SEC13 family.
    
 0.538
C12orf66
Chromosome 12 open reading frame 66.
    
 
 0.515
THSD1
Thrombospondin type 1 domain containing 1.
     
 0.484
G1U1Y5_RABIT
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.482
FAU
Ubiquitin-like domain-containing protein.
   
  0.482
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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