STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C14orf119Chromosome 14 open reading frame 119. (142 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.836
HEATR3
HEAT repeat containing 3.
   
  
 0.768
SEL1L2
SEL1L2 adaptor subunit of ERAD E3 ligase.
   
 
 0.758
EFCAB7
EF-hand calcium binding domain 7.
   
 0.734
ZNF397
Zinc finger protein 397.
   
 0.719
PYROXD1
Pyridine nucleotide-disulphide oxidoreductase domain 1.
   
 
 0.706
C11orf74
Chromosome 11 open reading frame 74.
      
 0.697
OR2L13
Olfactory receptor.
     
 0.682
LRFN1
Leucine rich repeat and fibronectin type III domain containing 1.
    
 
 0.606
LOC100355689
NACHT domain-containing protein.
   
 0.598
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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