Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SPIDRScaffold protein involved in DNA repair. (920 aa)    
Predicted Functional Partners:
SWSAP1
SWIM-type zinc finger 7 associated protein 1.
    
 
 0.966
FIGNL1
Fidgetin like 1; Belongs to the AAA ATPase family.
    
 0.847
MRNIP
MRN complex interacting protein.
      
 0.752
ZSWIM7
Zinc finger SWIM-type containing 7.
    
   0.737
UNC79
Uncharacterized protein.
      
 0.708
MCM9
Minichromosome maintenance 9 homologous recombination repair factor; Belongs to the MCM family.
      
 0.672
ERCC6L2
Uncharacterized protein.
      
 0.610
TWNK
Twinkle mtDNA helicase.
      
 0.582
MRPS22
Mitochondrial ribosomal protein S22.
      
 0.579
ZFYVE26
Zinc finger FYVE-type containing 26.
      
 0.572
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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