TRO protein (Oryctolagus cuniculus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

TRO

Trophinin. (1607 aa)

Predicted Functional Partners:

NSMCE4A

0.799

SMC6

0.738

SMC5

0.737

NSMCE2

0.728

ENSOCUP00000034643

0.696

NSMCE1

0.696

TROAP

0.657

GCNT1

0.626

GAL3ST4

0.592

ST6GALNAC1

0.542

Your Current Organism:

Oryctolagus cuniculus

NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSOCUP00000034643	NSMCE2	ENSOCUP00000034643	ENSOCUP00000040852	Uncharacterized protein.	NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase.	0.960
ENSOCUP00000034643	NSMCE4A	ENSOCUP00000034643	ENSOCUP00000000713	Uncharacterized protein.	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.	0.963
ENSOCUP00000034643	SMC5	ENSOCUP00000034643	ENSOCUP00000011406	Uncharacterized protein.	SMC_N domain-containing protein.	0.960
ENSOCUP00000034643	SMC6	ENSOCUP00000034643	ENSOCUP00000014879	Uncharacterized protein.	Uncharacterized protein.	0.960
ENSOCUP00000034643	TRO	ENSOCUP00000034643	ENSOCUP00000001470	Uncharacterized protein.	Trophinin.	0.696
GAL3ST4	GCNT1	ENSOCUP00000044102	ENSOCUP00000006836	Galactose-3-O-sulfotransferase 4.	Glucosaminyl (N-acetyl) transferase 1.	0.460
GAL3ST4	ST6GALNAC1	ENSOCUP00000044102	ENSOCUP00000042084	Galactose-3-O-sulfotransferase 4.	ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1; Belongs to the glycosyltransferase 29 family.	0.485
GAL3ST4	TRO	ENSOCUP00000044102	ENSOCUP00000001470	Galactose-3-O-sulfotransferase 4.	Trophinin.	0.592
GCNT1	GAL3ST4	ENSOCUP00000006836	ENSOCUP00000044102	Glucosaminyl (N-acetyl) transferase 1.	Galactose-3-O-sulfotransferase 4.	0.460
GCNT1	ST6GALNAC1	ENSOCUP00000006836	ENSOCUP00000042084	Glucosaminyl (N-acetyl) transferase 1.	ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1; Belongs to the glycosyltransferase 29 family.	0.970
GCNT1	TRO	ENSOCUP00000006836	ENSOCUP00000001470	Glucosaminyl (N-acetyl) transferase 1.	Trophinin.	0.626
NSMCE1	NSMCE2	ENSOCUP00000044883	ENSOCUP00000040852	Uncharacterized protein.	NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase.	0.993
NSMCE1	NSMCE4A	ENSOCUP00000044883	ENSOCUP00000000713	Uncharacterized protein.	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.	0.992
NSMCE1	SMC5	ENSOCUP00000044883	ENSOCUP00000011406	Uncharacterized protein.	SMC_N domain-containing protein.	0.991
NSMCE1	SMC6	ENSOCUP00000044883	ENSOCUP00000014879	Uncharacterized protein.	Uncharacterized protein.	0.987
NSMCE1	TRO	ENSOCUP00000044883	ENSOCUP00000001470	Uncharacterized protein.	Trophinin.	0.696
NSMCE2	ENSOCUP00000034643	ENSOCUP00000040852	ENSOCUP00000034643	NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase.	Uncharacterized protein.	0.960
NSMCE2	NSMCE1	ENSOCUP00000040852	ENSOCUP00000044883	NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase.	Uncharacterized protein.	0.993
NSMCE2	NSMCE4A	ENSOCUP00000040852	ENSOCUP00000000713	NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase.	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.	0.999
NSMCE2	SMC5	ENSOCUP00000040852	ENSOCUP00000011406	NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase.	SMC_N domain-containing protein.	0.999