Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRRX2Paired related homeobox 2. (174 aa)    
Predicted Functional Partners:
PRRX1
Paired related homeobox 1.
  
 
 
0.808
SRF
Serum response factor.
    
 0.551
LOC100350202
Homeobox domain-containing protein.
   
 
 0.534
TWIST2
Twist family bHLH transcription factor 2.
   
 
 0.531
ZBTB11
Zinc finger and BTB domain containing 11.
    
 0.490
HOXC4
Homeobox C4.
   
 0.475
TBX15
T-box transcription factor 15.
   
 0.455
ARX
Aristaless related homeobox.
   
 
  0.440
LOC103351908
Homeobox domain-containing protein.
   
 
  0.440
LMNTD1
Lamin tail domain containing 1.
    
 
 0.426
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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