Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACTN3 | CASQ1 | ENSOCUP00000024302 | ENSOCUP00000024484 | Actinin alpha 3 (gene/pseudogene). | Calsequestrin-1; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle. Calcium ions are bound by clusters of acidic residues at the protein surface, often at the interface between subunits. Can bind around 80 Ca(2+) ions. Regulates the release of lumenal Ca(2+) via the calcium release channel RYR1; this plays an important role in triggering muscle contraction. Negatively regulates store-operated Ca(2+) entry (SOCE) activity (By similarity). | 0.705 |
ACTN3 | CSRP3 | ENSOCUP00000024302 | ENSOCUP00000036808 | Actinin alpha 3 (gene/pseudogene). | Cysteine and glycine rich protein 3. | 0.503 |
ACTN3 | MYH7B | ENSOCUP00000024302 | ENSOCUP00000001968 | Actinin alpha 3 (gene/pseudogene). | Myosin heavy chain 7B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.448 |
ACTN3 | MYOZ2 | ENSOCUP00000024302 | ENSOCUP00000030208 | Actinin alpha 3 (gene/pseudogene). | Myozenin 2. | 0.660 |
ACTN3 | SMPX | ENSOCUP00000024302 | ENSOCUP00000001590 | Actinin alpha 3 (gene/pseudogene). | Small muscle protein X-linked. | 0.712 |
CASQ1 | ACTN3 | ENSOCUP00000024484 | ENSOCUP00000024302 | Calsequestrin-1; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle. Calcium ions are bound by clusters of acidic residues at the protein surface, often at the interface between subunits. Can bind around 80 Ca(2+) ions. Regulates the release of lumenal Ca(2+) via the calcium release channel RYR1; this plays an important role in triggering muscle contraction. Negatively regulates store-operated Ca(2+) entry (SOCE) activity (By similarity). | Actinin alpha 3 (gene/pseudogene). | 0.705 |
CASQ1 | MYOZ2 | ENSOCUP00000024484 | ENSOCUP00000030208 | Calsequestrin-1; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle. Calcium ions are bound by clusters of acidic residues at the protein surface, often at the interface between subunits. Can bind around 80 Ca(2+) ions. Regulates the release of lumenal Ca(2+) via the calcium release channel RYR1; this plays an important role in triggering muscle contraction. Negatively regulates store-operated Ca(2+) entry (SOCE) activity (By similarity). | Myozenin 2. | 0.551 |
CASQ1 | SMPX | ENSOCUP00000024484 | ENSOCUP00000001590 | Calsequestrin-1; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle. Calcium ions are bound by clusters of acidic residues at the protein surface, often at the interface between subunits. Can bind around 80 Ca(2+) ions. Regulates the release of lumenal Ca(2+) via the calcium release channel RYR1; this plays an important role in triggering muscle contraction. Negatively regulates store-operated Ca(2+) entry (SOCE) activity (By similarity). | Small muscle protein X-linked. | 0.611 |
CEACAM16 | LOXHD1 | ENSOCUP00000025026 | ENSOCUP00000038033 | Carcinoembryonic antigen related cell adhesion molecule 16. | Uncharacterized protein. | 0.730 |
CEACAM16 | SMPX | ENSOCUP00000025026 | ENSOCUP00000001590 | Carcinoembryonic antigen related cell adhesion molecule 16. | Small muscle protein X-linked. | 0.585 |
CSRP3 | ACTN3 | ENSOCUP00000036808 | ENSOCUP00000024302 | Cysteine and glycine rich protein 3. | Actinin alpha 3 (gene/pseudogene). | 0.503 |
CSRP3 | ITGB1BP2 | ENSOCUP00000036808 | ENSOCUP00000037055 | Cysteine and glycine rich protein 3. | Integrin subunit beta 1 binding protein 2. | 0.434 |
CSRP3 | MYOZ2 | ENSOCUP00000036808 | ENSOCUP00000030208 | Cysteine and glycine rich protein 3. | Myozenin 2. | 0.922 |
CSRP3 | SMPX | ENSOCUP00000036808 | ENSOCUP00000001590 | Cysteine and glycine rich protein 3. | Small muscle protein X-linked. | 0.731 |
ITGB1BP2 | CSRP3 | ENSOCUP00000037055 | ENSOCUP00000036808 | Integrin subunit beta 1 binding protein 2. | Cysteine and glycine rich protein 3. | 0.434 |
ITGB1BP2 | MYOZ2 | ENSOCUP00000037055 | ENSOCUP00000030208 | Integrin subunit beta 1 binding protein 2. | Myozenin 2. | 0.521 |
ITGB1BP2 | SMPX | ENSOCUP00000037055 | ENSOCUP00000001590 | Integrin subunit beta 1 binding protein 2. | Small muscle protein X-linked. | 0.615 |
LOXHD1 | CEACAM16 | ENSOCUP00000038033 | ENSOCUP00000025026 | Uncharacterized protein. | Carcinoembryonic antigen related cell adhesion molecule 16. | 0.730 |
LOXHD1 | SMPX | ENSOCUP00000038033 | ENSOCUP00000001590 | Uncharacterized protein. | Small muscle protein X-linked. | 0.580 |
MYH7B | ACTN3 | ENSOCUP00000001968 | ENSOCUP00000024302 | Myosin heavy chain 7B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | Actinin alpha 3 (gene/pseudogene). | 0.448 |
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