STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMPXSmall muscle protein X-linked. (88 aa)    
Predicted Functional Partners:
PRPS1
Pribosyltran_N domain-containing protein.
      
 0.806
CSRP3
Cysteine and glycine rich protein 3.
   
  
 0.731
ACTN3
Actinin alpha 3 (gene/pseudogene).
   
  
 0.712
ITGB1BP2
Integrin subunit beta 1 binding protein 2.
   
  
 0.615
CASQ1
Calsequestrin-1; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle. Calcium ions are bound by clusters of acidic residues at the protein surface, often at the interface between subunits. Can bind around 80 Ca(2+) ions. Regulates the release of lumenal Ca(2+) via the calcium release channel RYR1; this plays an important role in triggering muscle contraction. Negatively regulates store-operated Ca(2+) entry (SOCE) activity (By similarity).
   
  
 0.611
CEACAM16
Carcinoembryonic antigen related cell adhesion molecule 16.
   
  
 0.585
LOXHD1
Uncharacterized protein.
      
 0.580
MYH7B
Myosin heavy chain 7B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
  
 0.571
POU3F4
POU class 3 homeobox 4.
   
  
 0.571
MYOZ2
Myozenin 2.
   
  
 0.565
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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