Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NUDT7Nudix hydrolase 7. (255 aa)    
Predicted Functional Partners:
NUDT12
Nudix hydrolase 12.
   
 0.817
NUDT19
Nudix hydrolase 19.
     
 0.774
ACOT8
Acyl-CoA thioesterase 8.
   
 
 0.735
CROT
Carnitine O-octanoyltransferase; Belongs to the carnitine/choline acetyltransferase family.
   
 
 0.721
PEX12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
   
 
 0.698
ACOT4
Acyl-CoA thioesterase 4.
    
 0.689
NUDT2
Nudix hydrolase 2.
   
  
 0.671
HYDIN
HYDIN axonemal central pair apparatus protein.
    
  0.665
NRDE2
NRDE-2, necessary for RNA interference, domain containing.
      
 0.637
GNL2
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
     
 0.616
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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