Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM180AFamily with sequence similarity 180 member A. (161 aa)    
Predicted Functional Partners:
DUSP27
Dual specificity phosphatase 27, atypical; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.
      
 0.608
SLC25A29
Solute carrier family 25 member 29; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.608
CMTM5
CKLF like MARVEL transmembrane domain containing 5.
      
 0.564
PI15
Peptidase inhibitor 15; Belongs to the CRISP family.
      
 0.564
DENND10
DENN domain containing 10.
      
 0.542
UCMA
Upper zone of growth plate and cartilage matrix associated.
      
 0.522
TPRG1
Tumor protein p63 regulated 1.
      
 0.515
GULP1
GULP PTB domain containing engulfment adaptor 1.
      
 0.503
CLDN17
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
      
 0.490
SCUBE3
Signal peptide, CUB domain and EGF like domain containing 3.
   
  
 0.484
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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