SFPQ protein (Oryctolagus cuniculus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Cooccurrence

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Experiments

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[Homology]

Score

SFPQ

Splicing factor proline and glutamine rich. (545 aa)

Predicted Functional Partners:

NONO

0.977

RBM14

0.883

FUS

0.840

HNRNPA1

0.836

PSPC1

0.803

DHX9

0.798

PTBP2

0.772

DDX5

0.722

MATR3

0.718

HNRNPA2B1

0.675

Your Current Organism:

Oryctolagus cuniculus

NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DDX5	DHX9	ENSOCUP00000043262	ENSOCUP00000029909	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	DExH-box helicase 9.	0.969
DDX5	FUS	ENSOCUP00000043262	ENSOCUP00000020899	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	FUS RNA binding protein.	0.676
DDX5	HNRNPA1	ENSOCUP00000043262	ENSOCUP00000011492	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.788
DDX5	HNRNPA2B1	ENSOCUP00000043262	ENSOCUP00000021456	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	Heterogeneous nuclear ribonucleoprotein A2/B1.	0.659
DDX5	MATR3	ENSOCUP00000043262	ENSOCUP00000021695	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.787
DDX5	NONO	ENSOCUP00000043262	ENSOCUP00000017243	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.681
DDX5	RBM14	ENSOCUP00000043262	ENSOCUP00000019743	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	RRM domain-containing protein.	0.529
DDX5	SFPQ	ENSOCUP00000043262	ENSOCUP00000001616	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	Splicing factor proline and glutamine rich.	0.722
DHX9	DDX5	ENSOCUP00000029909	ENSOCUP00000043262	DExH-box helicase 9.	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	0.969
DHX9	FUS	ENSOCUP00000029909	ENSOCUP00000020899	DExH-box helicase 9.	FUS RNA binding protein.	0.710
DHX9	HNRNPA1	ENSOCUP00000029909	ENSOCUP00000011492	DExH-box helicase 9.	Uncharacterized protein.	0.851
DHX9	HNRNPA2B1	ENSOCUP00000029909	ENSOCUP00000021456	DExH-box helicase 9.	Heterogeneous nuclear ribonucleoprotein A2/B1.	0.701
DHX9	MATR3	ENSOCUP00000029909	ENSOCUP00000021695	DExH-box helicase 9.	Uncharacterized protein.	0.675
DHX9	NONO	ENSOCUP00000029909	ENSOCUP00000017243	DExH-box helicase 9.	Uncharacterized protein.	0.593
DHX9	RBM14	ENSOCUP00000029909	ENSOCUP00000019743	DExH-box helicase 9.	RRM domain-containing protein.	0.477
DHX9	SFPQ	ENSOCUP00000029909	ENSOCUP00000001616	DExH-box helicase 9.	Splicing factor proline and glutamine rich.	0.798
FUS	DDX5	ENSOCUP00000020899	ENSOCUP00000043262	FUS RNA binding protein.	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	0.676
FUS	DHX9	ENSOCUP00000020899	ENSOCUP00000029909	FUS RNA binding protein.	DExH-box helicase 9.	0.710
FUS	HNRNPA1	ENSOCUP00000020899	ENSOCUP00000011492	FUS RNA binding protein.	Uncharacterized protein.	0.609
FUS	HNRNPA2B1	ENSOCUP00000020899	ENSOCUP00000021456	FUS RNA binding protein.	Heterogeneous nuclear ribonucleoprotein A2/B1.	0.848