Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MAGOHMago homolog, exon junction complex subunit. (146 aa)    
Predicted Functional Partners:
RBM8A
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
   
 0.995
CASC3
CASC3 exon junction complex subunit.
    
 0.986
UPF2
UPF2 regulator of nonsense mediated mRNA decay.
    
 0.980
PNN
Pinin, desmosome associated protein.
   
 0.971
PYM1
PYM homolog 1, exon junction complex associated factor.
    
 0.969
UPF3B
UPF3B regulator of nonsense mediated mRNA decay.
    
 0.963
UPF3A
Smg4_UPF3 domain-containing protein.
    
 0.938
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.936
RNPS1
RRM domain-containing protein.
   
 0.926
DDX39B
DExD-box helicase 39B.
   
 0.906
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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