STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABITRAMActin binding transcription modulator. (181 aa)    
Predicted Functional Partners:
PUS10
Pseudouridine synthase 10.
   
   0.772
SPRYD7
SPRY domain containing 7.
      
 0.769
ACTL7A
Actin like 7A; Belongs to the actin family.
    
 
 0.761
NIPAL1
NIPA like domain containing 1.
      
 0.736
NIPAL3
NIPA like domain containing 3.
   
  
 0.722
PDZD3
PDZ domain containing 3.
   
  
 0.717
SERAC1
Serine active site containing 1.
   
  
 0.709
POLR2G
RNA polymerase II subunit G.
      
 0.702
ZACN
Zinc activated ion channel; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
  
 0.700
AMZ2
Archaelysin family metallopeptidase 2.
      
 0.698
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.