STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LDHDLactate dehydrogenase D. (484 aa)    
Predicted Functional Partners:
LDHC
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
   
 
 0.970
LDHB
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
   
 
 0.959
LDHA
L-lactate dehydrogenase A chain.
   
 
 0.948
HAGH
Lactamase_B domain-containing protein.
    
 0.939
PKLR
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.933
ME1
Malic enzyme.
  
 
 0.921
ME2
Malic enzyme.
  
 
 0.921
ME3
Malic enzyme; Belongs to the malic enzymes family.
  
 
 0.921
LDHAL6B
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
   
 
 0.918
PDHA2
Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
  
 0.917
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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