STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE2SDE2 telomere maintenance homolog. (443 aa)    
Predicted Functional Partners:
SLU7
SLU7 homolog, splicing factor.
   
 0.947
FAM32A
Family with sequence similarity 32 member A.
   
 0.941
PRKRIP1
PRKR interacting protein 1.
   
 0.934
SYF2
SYF2 pre-mRNA splicing factor.
   
  0.922
CDC40
WD_REPEATS_REGION domain-containing protein.
    
 0.883
ENSOCUP00000037445
WD_REPEATS_REGION domain-containing protein.
    
 0.883
CWC22
CWC22 spliceosome associated protein homolog.
    
  0.879
CDC5L
Cell division cycle 5 like.
    
 
 0.877
PRPF19
Pre-mRNA processing factor 19.
   
 
 0.870
CWC15
CWC15 spliceosome associated protein homolog.
   
 
 0.862
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.