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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G1SGJ3_RABITTranscription factor BTF3; Belongs to the NAC-beta family. (162 aa)    
Predicted Functional Partners:
G1SH81_RABIT
NAC-A/B domain-containing protein.
   
 
 0.836
ENSOCUP00000034120
NAC-A/B domain-containing protein.
   
 
 0.836
NACA
NAC-A/B domain-containing protein.
   
 
 0.836
NACAD
NAC-A/B domain-containing protein.
   
 
 0.830
RPL14
Ribosomal protein L14.
   
 
 0.825
RPL18A
60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.
   
   0.796
RPL8
Ribosomal_L2_C domain-containing protein.
   
 
 0.782
NUP93
Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family.
   
   0.732
RPL4
Ribos_L4_asso_C domain-containing protein.
   
 
 0.724
ENSOCUP00000037341
Ribos_L4_asso_C domain-containing protein.
   
 
 0.724
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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