Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRRC7PDZ domain-containing protein. (822 aa)    
Predicted Functional Partners:
LRRC1
Leucine rich repeat containing 1.
 
 
 
 0.908
U3KN95_RABIT
Uncharacterized protein.
 
      0.900
CAMK2A
Calcium/calmodulin dependent protein kinase II alpha; Belongs to the protein kinase superfamily.
    
 0.781
ZC2HC1A
Zinc finger C2HC-type containing 1A.
      
 0.741
SYNGAP1
Synaptic Ras GTPase activating protein 1.
   
 
 0.738
CNKSR2
Connector enhancer of kinase suppressor of Ras 2.
   
 
 0.738
GRIN2B
Glutamate ionotropic receptor NMDA type subunit 2B.
   
 0.683
CTNND2
Catenin delta 2.
    
 0.665
DLGAP4
Uncharacterized protein.
  
 
 
 0.635
GRIN2A
Glutamate ionotropic receptor NMDA type subunit 2A.
   
 0.628
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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