Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRRC40Leucine rich repeat containing 40. (602 aa)    
Predicted Functional Partners:
CNPY3
Canopy FGF signaling regulator 3.
    
 0.900
CNPY4
Canopy FGF signaling regulator 4.
    
 0.825
KCTD3
Potassium channel tetramerization domain containing 3.
    
  0.772
MRI1
Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). Belongs to the eIF-2B alpha/beta/delta subunits family. MtnA subfamily.
    
   0.767
TCAIM
T cell activation inhibitor, mitochondrial.
   
  
 0.737
CLEC2L
C-type lectin domain family 2 member L.
      
 0.729
BTBD8
BTB domain containing 8.
    
 0.721
BEND7
BEN domain containing 7.
      
 0.716
NABP2
Nucleic acid binding protein 2.
      
 0.712
SNAPC3
Small nuclear RNA activating complex polypeptide 3.
      
 0.707
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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