Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZNF142Uncharacterized protein. (1593 aa)    
Predicted Functional Partners:
MRPS16
Uncharacterized protein.
    
 0.790
SPCS2
Uncharacterized protein.
    
 
 0.655
RAVER1
Ribonucleoprotein, PTB binding 1.
      
 0.640
PIH1D1
PIH1 domain containing 1.
    
 
 0.609
AGMAT
Agmatinase; Belongs to the arginase family.
      
 0.591
STK36
Serine/threonine kinase 36.
   
 0.575
ARAP3
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3.
   
  
 0.562
LOC100342163
Uncharacterized protein.
   
 0.545
PTPRE
Uncharacterized protein.
   
 
 0.536
SAMM50
SAMM50 sorting and assembly machinery component.
      
 0.530
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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