Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SRSF11RRM domain-containing protein. (485 aa)    
Predicted Functional Partners:
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.914
RBM25
RNA binding motif protein 25.
   
 
 0.913
SRSF5
Serine and arginine rich splicing factor 5.
   
 0.908
SRSF7
CCHC-type domain-containing protein.
   
 0.896
SRSF4
Serine and arginine rich splicing factor 4.
   
 0.894
SRSF9
Serine and arginine rich splicing factor 9.
   
 0.893
RBM39
RNA binding motif protein 39 isoform a (Predicted).
   
 
 0.884
SRSF10
Serine and arginine rich splicing factor 10.
   
 0.881
SRSF6
Serine/arginine-rich-splicing factor 6.
   
 0.878
PNISR
PNN interacting serine and arginine rich protein.
   
 
 0.859
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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