Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RBM23RNA binding motif protein 23. (444 aa)    
Predicted Functional Partners:
RBM25
RNA binding motif protein 25.
   
 0.969
DDX5
DEAD-box helicase 5; Belongs to the DEAD box helicase family.
   
 0.961
SON
SON DNA binding protein.
   
 0.943
SF1
CCHC-type domain-containing protein.
   
 0.913
RBM5
RNA binding motif protein 5.
   
 0.887
SREK1
Splicing regulatory glutamic acid and lysine rich protein 1.
   
 
 0.882
SRRM2
Serine/arginine repetitive matrix 2.
   
 0.852
PRPF40A
Uncharacterized protein.
   
 0.844
ENSOCUP00000048230
Uncharacterized protein.
   
 0.844
SF3B1
SF3b1 domain-containing protein.
   
 
 0.840
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
Server load: low (12%) [HD]