STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
REEP4Uncharacterized protein. (485 aa)    
Predicted Functional Partners:
CCDC150
Coiled-coil domain containing 150.
   
  
 0.744
ATL1
Atlastin GTPase 1.
   
 
 0.736
NEMP1
Nuclear envelope integral membrane protein 1.
   
  
 0.719
DZIP1
DAZ interacting zinc finger protein 1.
      
 0.697
RIBC2
RIB43A domain with coiled-coils 2.
   
 
 0.687
RTN4
Reticulon.
   
 
 0.677
RTN3
Reticulon.
   
 
 0.672
CEP85
Centrosomal protein 85.
   
  
 0.657
CCDC34
Coiled-coil domain containing 34.
   
  
 0.655
CCDC77
Coiled-coil domain containing 77.
      
 0.649
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.