STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGAAspartylglucosaminidase. (346 aa)    
Predicted Functional Partners:
POLR3GL
DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.
   
  
 0.738
CHRNB3
Cholinergic receptor nicotinic beta 3 subunit.
      
 0.587
CPQ
Carboxypeptidase Q.
   
  
 0.581
NSUN5
Uncharacterized protein.
      
 0.577
HPDL
4-hydroxyphenylpyruvate dioxygenase.
      
 0.540
HSPG2
Heparan sulfate proteoglycan 2.
      
 0.540
ASL
Uncharacterized protein.
     
 0.531
SIAE
Sialic acid acetylesterase.
      
 0.530
OTC
Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
   
 
  0.520
ASNSD1
Glutamine amidotransferase type-2 domain-containing protein.
   
 
 0.499
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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