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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SPATA7Spermatogenesis associated 7. (581 aa)    
Predicted Functional Partners:
RPGRIP1
RPGR interacting protein 1.
   
 
 0.804
AIPL1
Aryl hydrocarbon receptor interacting protein like 1.
      
 0.789
CEP290
Centrosomal protein 290.
   
  
 0.758
RDH12
Retinol dehydrogenase 12; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.740
SPATA17
Spermatogenesis associated 17.
      
 0.728
LRAT
Lecithin retinol acyltransferase.
      
 0.670
NPHP4
Uncharacterized protein.
   
 
 0.670
RPE65
Retinoid isomerohydrolase RPE65.
      
 0.654
SERPINA12
Serpin family A member 12; Belongs to the serpin family.
    
   0.651
MAATS1
CFAP91 domain-containing protein.
      
 0.648
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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