Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NDNFNeuron derived neurotrophic factor. (643 aa)    
Predicted Functional Partners:
PARM1
Prostate androgen-regulated mucin-like protein 1.
      
 0.588
RELN
Uncharacterized protein.
      
 0.566
LAMP5
Lysosomal associated membrane protein family member 5.
   
  
 0.526
LYPD1
LY6/PLAUR domain containing 1.
      
 0.517
INSYN2A
Inhibitory synaptic factor 2A.
      
 0.504
SNCG
Gamma-synuclein; Belongs to the synuclein family.
      
 0.495
CRISPLD2
Cysteine rich secretory protein LCCL domain containing 2.
      
 0.492
CUX2
Homeobox protein cut-like.
      
 0.481
CHRNA6
Cholinergic receptor nicotinic alpha 6 subunit.
      
 0.480
SLC17A8
Solute carrier family 17 member 8.
      
 0.452
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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