STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NDNFNeuron derived neurotrophic factor. (643 aa)    
Predicted Functional Partners:
PARM1
Prostate androgen-regulated mucin-like protein 1.
      
 0.613
LAMP5
Lysosomal associated membrane protein family member 5.
   
  
 0.599
LMBRD1
LMBR1 domain containing 1.
      
 0.590
RELN
Uncharacterized protein.
      
 0.542
C1QTNF2
C1q and TNF related 2.
    
 
 0.529
TMEM171
Transmembrane protein 171.
      
 0.471
LYPD1
LY6/PLAUR domain containing 1.
      
 0.464
VTA1
Vesicle trafficking 1.
   
  
 0.452
TAFA1
TAFA chemokine like family member 1.
      
 0.451
SNCG
Gamma-synuclein; Belongs to the synuclein family.
      
 0.448
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.