STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAF1TRPM8 channel associated factor 1. (1028 aa)    
Predicted Functional Partners:
RTL8C
Retrotransposon Gag like 8C.
    
 
 0.739
CRYZ
Crystallin zeta.
   
  
 0.611
PPID
Peptidylprolyl isomerase D.
      
 0.609
NCOA7
Nuclear receptor coactivator 7.
      
 0.595
TRPM8
Transient receptor potential cation channel subfamily M member 8.
      
 0.587
SYNGR2
Synaptogyrin 2.
      
 0.530
REEP2
Receptor expression-enhancing protein.
      
 0.525
NALCN
Sodium leak channel, non-selective.
      
 0.485
FAM133A
Family with sequence similarity 133 member A.
      
 0.485
APBB1IP
Uncharacterized protein.
      
 0.463
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.