Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
TCAF1TRPM8 channel associated factor 1. (1028 aa)    
Predicted Functional Partners:
RTL8C
Retrotransposon Gag like 8C.
    
 
 0.718
TRPM8
Transient receptor potential cation channel subfamily M member 8.
      
 0.681
CRYZ
Crystallin zeta.
   
  
 0.548
PPID
Peptidylprolyl isomerase D.
      
 0.538
TSC22D2
TSC22 domain family member 2.
      
 0.523
NCOA7
Nuclear receptor coactivator 7.
      
 0.522
ENSOCUP00000028252
Uncharacterized protein.
      
 0.496
DUSP22
Uncharacterized protein.
      
 0.491
ARHGEF5
Rho guanine nucleotide exchange factor 5.
      
 0.465
CD8B
Ig-like domain-containing protein.
      
 0.461
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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