STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DDB2Damage specific DNA binding protein 2. (427 aa)    
Predicted Functional Partners:
DDB1
Damage specific DNA binding protein 1.
   
 0.999
CUL4A
Cullin 4A; Belongs to the cullin family.
    
 0.996
CUL4B
Cullin 4B; Belongs to the cullin family.
    
 0.993
COPS2
COP9 signalosome subunit 2.
    
 0.987
XPC
XPC complex subunit, DNA damage recognition and repair factor.
   
 0.980
USP24
Ubiquitin specific peptidase 24; Belongs to the peptidase C19 family.
   
 0.980
COPS3
COP9 signalosome subunit 3.
    
 0.980
COPS4
COP9 signalosome subunit 4.
    
 0.980
COPS7A
COP9 signalosome subunit 7A.
    
 0.973
COPS5
COP9 signalosome subunit 5.
    
 0.972
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.