STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POC1APOC1 centriolar protein A. (406 aa)    
Predicted Functional Partners:
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
   
0.822
SETD1B
SET domain containing 1B, histone lysine methyltransferase.
   
 0.797
CENPW
Uncharacterized protein.
   
 0.773
UNC79
Uncharacterized protein.
    
 0.716
CDC20B
Cell division cycle 20B.
  
 0.694
CXXC1
CXXC finger protein 1.
   
 
 0.685
ASH2L
B30.2/SPRY domain-containing protein.
   
 0.677
ENSOCUP00000028511
B30.2/SPRY domain-containing protein.
   
 0.677
ENSOCUP00000045159
Uncharacterized protein.
   
 0.677
KANSL2
KAT8 regulatory NSL complex subunit 2.
    
 0.650
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.