STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMC7Transmembrane channel-like protein. (744 aa)    
Predicted Functional Partners:
DUS2
Dihydrouridine synthase 2.
   
  
 0.561
COPRS
Coordinator of PRMT5 and differentiation stimulator.
      
 0.547
GCFC2
GC-rich sequence DNA-binding factor 2.
      
 0.539
MAP6D1
MAP6 domain containing 1.
      
 0.536
COMTD1
Catechol-O-methyltransferase domain containing 1.
   
  
 0.524
BICC1
BicC family RNA binding protein 1.
   
 
 0.463
PODXL2
Podocalyxin like 2.
   
  
 0.449
DISP2
Dispatched RND transporter family member 2.
      
 0.433
MDN1
Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family.
      
 0.432
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.