ASB17 protein (Oryctolagus cuniculus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ASB17

Ankyrin repeat and SOCS box containing 17. (295 aa)

Predicted Functional Partners:

ASB2

0.869

SRFBP1

0.792

ASB11

0.790

CLEC12B

0.789

CCDC126

0.755

OR5M11

0.752

OR5AR1

0.747

DPY19L3

0.742

ASB7

0.722

TRDV3

0.697

Your Current Organism:

Oryctolagus cuniculus

NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASB11	ASB17	ENSOCUP00000015248	ENSOCUP00000001812	Ankyrin repeat and SOCS box containing 11.	Ankyrin repeat and SOCS box containing 17.	0.790
ASB11	ASB2	ENSOCUP00000015248	ENSOCUP00000025319	Ankyrin repeat and SOCS box containing 11.	Ankyrin repeat and SOCS box containing 2.	0.576
ASB11	ASB7	ENSOCUP00000015248	ENSOCUP00000012176	Ankyrin repeat and SOCS box containing 11.	Ankyrin repeat and SOCS box containing 7.	0.594
ASB17	ASB11	ENSOCUP00000001812	ENSOCUP00000015248	Ankyrin repeat and SOCS box containing 17.	Ankyrin repeat and SOCS box containing 11.	0.790
ASB17	ASB2	ENSOCUP00000001812	ENSOCUP00000025319	Ankyrin repeat and SOCS box containing 17.	Ankyrin repeat and SOCS box containing 2.	0.869
ASB17	ASB7	ENSOCUP00000001812	ENSOCUP00000012176	Ankyrin repeat and SOCS box containing 17.	Ankyrin repeat and SOCS box containing 7.	0.722
ASB17	CCDC126	ENSOCUP00000001812	ENSOCUP00000010660	Ankyrin repeat and SOCS box containing 17.	Coiled-coil domain containing 126.	0.755
ASB17	CLEC12B	ENSOCUP00000001812	ENSOCUP00000006391	Ankyrin repeat and SOCS box containing 17.	C-type lectin domain family 12 member B.	0.789
ASB17	DPY19L3	ENSOCUP00000001812	ENSOCUP00000011366	Ankyrin repeat and SOCS box containing 17.	Dpy-19 like C-mannosyltransferase 3.	0.742
ASB17	OR5AR1	ENSOCUP00000001812	ENSOCUP00000009375	Ankyrin repeat and SOCS box containing 17.	Olfactory receptor.	0.747
ASB17	OR5M11	ENSOCUP00000001812	ENSOCUP00000047625	Ankyrin repeat and SOCS box containing 17.	Olfactory receptor.	0.752
ASB17	SRFBP1	ENSOCUP00000001812	ENSOCUP00000027125	Ankyrin repeat and SOCS box containing 17.	Serum response factor binding protein 1.	0.792
ASB17	TRDV3	ENSOCUP00000001812	ENSOCUP00000022356	Ankyrin repeat and SOCS box containing 17.	T cell receptor delta variable 3.	0.697
ASB2	ASB11	ENSOCUP00000025319	ENSOCUP00000015248	Ankyrin repeat and SOCS box containing 2.	Ankyrin repeat and SOCS box containing 11.	0.576
ASB2	ASB17	ENSOCUP00000025319	ENSOCUP00000001812	Ankyrin repeat and SOCS box containing 2.	Ankyrin repeat and SOCS box containing 17.	0.869
ASB2	ASB7	ENSOCUP00000025319	ENSOCUP00000012176	Ankyrin repeat and SOCS box containing 2.	Ankyrin repeat and SOCS box containing 7.	0.577
ASB7	ASB11	ENSOCUP00000012176	ENSOCUP00000015248	Ankyrin repeat and SOCS box containing 7.	Ankyrin repeat and SOCS box containing 11.	0.594
ASB7	ASB17	ENSOCUP00000012176	ENSOCUP00000001812	Ankyrin repeat and SOCS box containing 7.	Ankyrin repeat and SOCS box containing 17.	0.722
ASB7	ASB2	ENSOCUP00000012176	ENSOCUP00000025319	Ankyrin repeat and SOCS box containing 7.	Ankyrin repeat and SOCS box containing 2.	0.577
CCDC126	ASB17	ENSOCUP00000010660	ENSOCUP00000001812	Coiled-coil domain containing 126.	Ankyrin repeat and SOCS box containing 17.	0.755