STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MADDMAP kinase activating death domain. (1646 aa)    
Predicted Functional Partners:
PIBF1
Progesterone immunomodulatory binding factor 1.
      
 0.777
RAB27B
RAB27B, member RAS oncogene family.
     
 0.762
RAB27A
RAB27A, member RAS oncogene family.
     
 0.745
TNFRSF1A
TNF receptor superfamily member 1A.
    
 0.713
CHM
Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.
     
 0.627
RAB3B
RAB3B, member RAS oncogene family.
   
 0.620
RAB3GAP2
RAB3 GTPase activating non-catalytic protein subunit 2.
      
 0.620
RAB35
Uncharacterized protein.
      
 0.619
RAB3D
RAB3D, member RAS oncogene family.
    
 0.616
RAB3C
RAB3C, member RAS oncogene family.
    
 0.616
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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