Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TAP1Transporter 1, ATP binding cassette subfamily B member. (742 aa)    
Predicted Functional Partners:
TAP2
Uncharacterized protein.
  
0.998
TAPBP
TAP binding protein.
   
 0.997
PSMB9
Uncharacterized protein.
   
 0.982
PDIA3
Protein disulfide-isomerase.
   
 0.978
PSMB8
Proteasome subunit beta.
 
 
 0.949
TAPBPL
TAP binding protein like.
   
 
 0.928
STAT1
Signal transducer and activator of transcription.
   
 
 0.873
RPA2
Replication protein A2.
   
 0.854
CALR3
Calreticulin.
   
 0.852
NLRC5
NLR family CARD domain containing 5.
   
  
 0.814
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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