STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DHX16DEAH-box helicase 16. (1044 aa)    
Predicted Functional Partners:
GPKOW
G-patch domain and KOW motifs.
   
 0.999
PRPF8
Pre-mRNA processing factor 8.
   
 0.995
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
   
 0.995
SF3B2
Splicing factor 3b subunit 2.
   
 0.994
CDC5L
Cell division cycle 5 like.
 
 
 0.993
XAB2
XPA binding protein 2.
   
 0.991
DHX38
DEAH-box helicase 38.
  
0.983
RNF113A
Ring finger protein 113A.
   
 0.981
SF3B3
Splicing factor 3b subunit 3.
   
 0.980
CWC22
CWC22 spliceosome associated protein homolog.
   
 0.975
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.