STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMLPromyelocytic leukemia. (860 aa)    
Predicted Functional Partners:
RARA
Retinoic acid receptor alpha.
    
 0.987
DAXX
Death domain associated protein.
   
 0.969
UBE2I
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.906
G1TG12_RABIT
Small ubiquitin-related modifier.
    
 0.834
SUMO1
Small ubiquitin-related modifier.
    
 0.828
G1TSW1_RABIT
Ubiquitin-like domain-containing protein.
    
 0.786
ENSOCUP00000030650
Rad60-SLD domain-containing protein.
    
 0.786
KCTD2
Uncharacterized protein.
    
 0.767
LOC100345604
Rad60-SLD domain-containing protein.
    
 0.751
CREBBP
CREB binding protein.
    
 0.745
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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