Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GATA4GATA binding protein 4. (444 aa)    
Predicted Functional Partners:
NKX2-5
NK2 homeobox 5.
   
 0.995
ZFPM2
Zinc finger protein, FOG family member 2.
    
 0.985
FOXA2
Forkhead box A2.
   
 0.972
SRF
Serum response factor.
    
 0.970
TBX20
T-box transcription factor 20.
   
 0.952
MEF2C
Myocyte enhancer factor 2C.
    
 0.942
TBX5
T-box transcription factor 5.
   
 0.926
NFATC3
Nuclear factor of activated T cells 3.
    
 0.907
NFATC4
Nuclear factor of activated T cells 4.
     
 0.907
NFATC1
RHD domain-containing protein.
    
 0.897
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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