Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FASTKD1FAST kinase domains 1. (831 aa)    
Predicted Functional Partners:
FASTKD3
FAST kinase domains 3.
  
 
0.828
FAT2
FAT atypical cadherin 2.
      
 0.616
FASTKD2
RAP domain-containing protein.
   
  
0.596
KDM1B
Lysine demethylase 1B.
      
 0.595
TRUB2
Uncharacterized protein.
      
 0.590
RPUSD4
RNA pseudouridine synthase D4.
      
 0.588
CYHR1
Cysteine and histidine rich 1.
      
 0.579
PTCD1
Uncharacterized protein.
      
 0.571
TANGO6
Uncharacterized protein.
      
 0.563
MBOAT4
Membrane bound O-acyltransferase domain containing 4; Belongs to the membrane-bound acyltransferase family.
      
 0.560
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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