STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FASTKD1FAST kinase domains 1. (831 aa)    
Predicted Functional Partners:
PLEKHM3
Pleckstrin homology domain containing M3.
   
  
 0.696
RPUSD4
RNA pseudouridine synthase D4.
      
 0.661
TANGO6
Uncharacterized protein.
      
 0.647
KDM1B
Lysine demethylase 1B.
   
  
 0.621
SAAL1
Tryptophan 5-hydroxylase 1; Belongs to the biopterin-dependent aromatic amino acid hydroxylase family.
   
  
 0.613
MRPL47
Mitochondrial ribosomal protein L47.
   
  
 0.611
TRUB2
Uncharacterized protein.
      
 0.601
PTCD1
Uncharacterized protein.
   
  
 0.598
FAT2
FAT atypical cadherin 2.
   
  
 0.589
MRM1
Mitochondrial rRNA methyltransferase 1.
   
  
 0.585
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.