STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RABIFRAB interacting factor. (123 aa)    
Predicted Functional Partners:
RAB10
RAB10, member RAS oncogene family.
    
 
 0.878
RAB13
Uncharacterized protein.
    
 
 0.872
CDC42-2
Uncharacterized protein.
    
 
 0.869
CDC42
Uncharacterized protein.
    
 
 0.869
RAB1A
RAB1A, member RAS oncogene family.
    
 
 0.856
RAB8B
RAB8B, member RAS oncogene family.
    
 
 0.848
ARF6
ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.
    
 
 0.839
RHOA
Ras homolog family member A.
    
 
 0.838
RCC1
Uncharacterized protein.
      
 0.834
RAB35
Uncharacterized protein.
   
 
 0.819
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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