Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ERCC3ERCC excision repair 3, TFIIH core complex helicase subunit. (782 aa)    
Predicted Functional Partners:
GTF2H5
General transcription factor IIH subunit 5.
    
 0.998
ERCC2
ERCC excision repair 2, TFIIH core complex helicase subunit.
   
 0.998
GTF2H4
General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
  
 0.997
GTF2H3
General transcription factor IIH subunit 3.
   
 0.996
XPA
XPA, DNA damage recognition and repair factor.
    
 0.995
MNAT1
CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex.
   
 0.993
CCNH
Cyclin H; Belongs to the cyclin family.
    
 0.991
CDK7
Cyclin dependent kinase 7; Belongs to the protein kinase superfamily.
   
 0.991
BIVM
Uncharacterized protein.
   
 0.990
ERCC4
ERCC excision repair 4, endonuclease catalytic subunit.
   
 0.990
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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