Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLITRK2SLIT and NTRK like family member 2. (845 aa)    
Predicted Functional Partners:
PTPRD
Protein tyrosine phosphatase receptor type D.
    
 0.955
PTPRF
Protein tyrosine phosphatase receptor type F.
    
 0.928
SLITRK4
SLIT and NTRK like family member 4.
   
 
  0.848
SLITRK6
SLIT and NTRK like family member 6.
   
 
  0.845
NLGN1
Neuroligin 1.
   
 
 0.726
IL1RAPL1
Interleukin 1 receptor accessory protein like 1.
   
 0.701
SLITRK1
SLIT and NTRK like family member 1.
   
 
  0.685
LRR1
Leucine rich repeat protein 1.
      
 0.658
NLGN2
Neuroligin 2.
   
 
 0.633
PTPRA
Receptor-type tyrosine-protein phosphatase alpha.
    
 0.576
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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