STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VKORC1Vitamin K epoxide reductase complex subunit 1. (162 aa)    
Predicted Functional Partners:
GGCX
Gamma-glutamyl carboxylase.
   
 
 0.987
NQO1
NAD(P)H quinone dehydrogenase 1.
     
 0.932
TRPT1
tRNA phosphotransferase 1.
   
  
 0.757
TTC9B
Tetratricopeptide repeat domain 9B.
      
 0.698
NUDT15
Nudix hydrolase 15.
      
 0.688
THYN1
Thymocyte nuclear protein 1.
   
  
 0.667
ANKDD1B
Ankyrin repeat and death domain containing 1B.
   
  
 0.612
TPMT
Thiopurine S-methyltransferase.
      
 0.610
ERICH1
Uncharacterized protein.
      
 0.593
HEATR6
HEAT repeat containing 6.
      
 0.554
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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