STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PATZ1POZ and AT hook containing zinc finger 1 long C isoform (Predicted). (687 aa)    
Predicted Functional Partners:
LOC100340423
Ribosomal_S10 domain-containing protein.
    
 
 0.698
EWSR1
Uncharacterized protein.
    
 
 0.608
SIDT1
SID1 transmembrane family member 1.
   
 0.568
NKX2-6
NK2 homeobox 6.
      
 0.551
LRRC4
Leucine rich repeat containing 4.
    
 0.534
BEND2
Uncharacterized protein.
      
 0.523
VEPH1
Ventricular zone expressed PH domain containing 1.
      
 0.522
MAMLD1
Mastermind like domain containing 1.
   
 
 0.515
TSC22D4
TSC22 domain family member 4.
    
 
 0.499
GABPB2
GA binding protein transcription factor subunit beta 2.
    
 0.494
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.