Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D8TBC1 domain family member 8. (1114 aa)    
Predicted Functional Partners:
TBC1D22B
TBC1 domain family member 22B.
      
 0.753
TBC1D19
TBC1 domain family member 19.
      
 0.731
TBC1D13
TBC1 domain family member 13.
      
 0.699
TBC1D20
TBC1 domain family member 20.
      
 0.660
CDC16
Cell division cycle 16.
      
 0.655
GAK
Cyclin G associated kinase.
   
 
  0.649
TBC1D16
TBC1 domain family member 16.
      
 0.613
TBC1D5
TBC1 domain family member 5.
   
  
 0.613
TBC1D7
TBC1 domain family member 7.
      
 0.586
YIPF6
Protein YIPF.
   
 
  0.538
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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